This collection includes theses, dissertations, and professional papers from the University of Montana Division of Biological Sciences. Theses, dissertations, and professional papers from all University of Montana departments and programs may be searched here.

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Theses/Dissertations from 2005

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Long-term persistence of isolated fish populations in the Alexander Archipelago, Kim Hastings

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Time-resolved analysis of ribosomal RNA dynamics, Scott Patrick Hennelly

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A biogeographical approach to plant invasions: Ecology and evolution of an invasive ruderal in native and introduced ranges, José L. Hierro

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The ribosome builder: A software project to simulate the ribosome, William A. Knight

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The tradeoffs associated with leg regeneration in stick insects (Insecta: Phasmidae), Tara Lynne Maginnis

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Physiological ecology of male and female trees of Austrocedrus chilensis along a moisture gradient in Patagonia Argentina, Cecilia Inés Nuñez

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Nontarget effects of host-specific biological control agents, Dean E. Pearson

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Ecology of sulfate reducing bacteria in relation to the fate and stability of metal(loid)s in a mining-impacted freshwater sediment, Srividhya Ramamoorthy

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Polar filament discharge in the myxospores of Myxobolus cerebralis, Stephen TwoWolves

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Effect of bioactive particulates and lipopolysaccharide on immune regulation via class A scavenger receptor and Toll -like receptor 4, Rong Wang

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Effects of historical and contemporary factors on genetic diversity in the mountain whitefish (Prosopium williamsoni), Andrew Robert Whiteley

Theses/Dissertations from 2004

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The role of ribosomal protein L11 and the L11-binding rRNA in protein synthesis on the prokaryotic ribosome, William Sean Bowen

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Characterization and expression analysis of the Bartonella bacilliformis groES-EL operon, Julie A. Callison

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The ecology of parafluvial ponds on a Rocky Mountain flood plain, Samantha D. Chilcote

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Characterization of antibiotic resistance mutations in Borrelia burgdorferi, Daniel C. Criswell

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Patterns and consequences of dispersal in Columbia spotted frogs (Rana luteiventris), William Christopher Funk

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The host inflammatory response to a xenograft arterial bypass in a rabbit model, Albert C. Grobe

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Pinus albicaulis seedling regeneration after fire, Judy L. Perkins

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Urban air particulate PM1648 and asthma exacerbation, Jordan C. Schneider

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The sensitivity of glutamate transport to the depletion of glutathione, Todd M. Seib

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Demography of the Columbia spotted frog (Rana luteiventris ) in the presence or absence of fish in the Absaroka-Beartooth Wilderness Montana, Aimee C. Wyrick

Theses/Dissertations from 2003

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Dispersers and herbivores : the positive and negative effects of consumers on plants, Lindsay K. Amsberry

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The effects of fluvially -deposited heavy metals on hyporheic zone microbial community structure, Kevin Paul Feris

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Functional characterization of ribosomal protein L11 mutants in Escherichia coli, Stephen A. George

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Ecology and persistence of sylvatic plague in Phillips County Montana, Brian E. Holmes

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Structural analysis of dimerization-competent conformational variants within the 5'-untranslated region of human immunodeficiency virus type-2 genomic RNA, John D. Ivanovitch

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Long-term Osprey (Pandion haliaetus) population dynamics in relation to food web change at Flathead lake MT, Brandon E. Jackson

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Building ecological literacy through ornithology-based fieldtrips: Experiences from an educational program in Patagonia, Kimberly L. Olson

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Life history strategies : evolution of developmental periods in birds, Maria Gabriela Palacios

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Mechanisms for invasion by non-native trees: Facilitation ecosytem engineering and escape from belowground enemies, Kurt O. Reinhart

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Complexity and variation in the effects of low-severity fires on forest biota, Karen Christine Short

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Thermodynamic and kinetic studies on RNA dimerization of the HIV-2 leader region, Hector N. Valtierra

Theses/Dissertations from 2002

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Population genetics and conservation of the freshwater mussel Margaritifera falcata from the northwestern United States, Lindsay P. Anderson

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Effects of Pinus flexilis on the dynamics and structure of plant communities on the northern Rocky Mountain front and Training biologists for emerging niches in non-traditional jobs, Dayna Baumeister

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Movement patterns of fluvial bull trout in relation to habitat parameters in the Rock Creek drainage Missoula and Granite Counties Montana, Gary Carnefix

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Cloning and characterization of a gene encoding a protein associated with the bacteriophage-like particle of Bartonella bacilliformis, Leo E. Choquette

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The role and regulation of the invasion -associated locus B (ialB) gene of Bartonella bacilliformis, Sherry A. Coleman

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The antibacterial immune response to Escherichia coli in the flea Xenopsylla cheopis, James David Driver

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Microbial community production and tolerance in heavy metals polluted sediment, Christian D. Frazar

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Epidemiology and host -parasite interactions between Myxobolus cerebralis the causative agent of salmonid whirling disease and its oligochaete host Tubifex tubifex, Michael A. Gilbert

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Analysis of the bactericidal activity of antiserum raised against the N-terminal half of an 85-kilodalton outer membrane protein of Neisseria meningitidis, Leoned G. Gines

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Hybridization between westslope cutthroat trout (Oncorhynchus clarki lewisi) and rainbow trout (O. mykiss) : distribution and limiting factors, Nathaniel P. Hitt

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Analysis of bacterial transport and survival in the subsurface, William P. Kovacik

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Arbuscular mycorrhizae, glomalin, and soil aggregation in spotted knapweed invaded soils, Emily Rose Lutgen

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Arbuscular mycorrhizae in mine revegetation as affected by fungal source plant species and abiotic stress, October Seastone Moynahan

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Insect herbivory and defoliation on Centaurea species: The roles of neighbors allelopathy and arbuscular mycorrhizal fungi, Beth A. Newingham

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Effects of thinning, prescribed burning, and burning season on the physiological performance of ponderosa pine, Gregory D. Peters

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Lake food webs: Biological and chemical perspectives, Craig P. Stafford

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Molecular population genetics of Arabidopsis species, Barbara E. Stranger

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Black-capped chickadees (Poecile atricapilla) convey predator-specific information in their "chick-a-dee" vocalizations, Christopher Neal Templeton

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Vole use of coarse woody debris and its implications for habitat and fuel management, Dalit Ucitel

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Growth and clonal integration of sweetgrass (Hierochloe odorata) in western Montana, Dawn M. White

Theses/Dissertations from 2001

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Subsurface microbiology: Viral transport studies and the microbial ecology of landfill environments, Patrick N. Ball

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Temporary hydrologic connections make "isolated" wetlands function at the landscape scale, Bradley J. Cook

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A rank-specific cost-benefit analysis of single- and mixed-species flocking in the black-capped chickadee, Charles Eldermire

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Synthetic lipid A mimetic adjuvants stimulate the maturational and functional development of murine bone marrow derived dendritic cells, Kevin Floyd

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Controls on glomalin production| Effect of host carbon supply, arbuscular mycorrhizal fungal species and cellular mechanism of secretion, Griselda Yolanda Hernandez

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Activation of connective tissue cells in vital pericardium relevance to the behavior of vital autologous pericardial implants in cardiovascular surgeries, Douglas C. Marchion

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Ecological genetics of local adaptation: Climatic races in Arabidopsis thaliana and Arabis fecunda, John K. McKay

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Effects of lipid and glucose on in vitro nodule formation and calcification by sheep aortic smooth muscle cells, Amy E. Osborne

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Morphologic and genetic characterization of potential oligochaete alternate hosts of Myxobolus cerebralis, Kathryn M. Sweeney

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Genetic demographic and ecological effects of habitat fragmentation, David Andrew Tallmon

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The study of tRNA-rRNA interactions by attaching Cu(II):phenanthroline to tRNA at position 16, Jing Yuan

Theses/Dissertations from 2000

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Physiological consequences of exposure to elevated carbon dioxide during development in birds, Ryan W. Bavis

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Characterization of an interleukin-1-like molecule in Schistosoma mansoni-resistant Biomphalaria glabrata, James David Driver

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Identification and characterization of a bacteriophage of Borrelia burgdorferi, Christian H. Eggers

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Evolutionary change as a theme for a high school biology course: A literature review and thematic unit, Arlan L. Langmaid

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The effects of natural variability on the use of macroinvertebrates as bioindicators of disturbance in intermontane depressional wetlands in northwestern Montana USA, Vicki E. Ludden

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Characterization of a cleavage-defective HIV-1 envelope protein, Kimberly D. Meade-White

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The dispersal /establishment dilemma: Effects of environmental variation on reproductive tradeoffs for an animal -dispersed plant, Wendy Parson

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Benthic macroinvertebrate response to hyporheic exchange on two alluvial flood plains in northwest Montana U.S.A., David M. Pepin

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Influence of prey density on post-fire habitat use of the black-backed woodpecker, Hugh D. Powell

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The effects of oxidative air pollutants on plant cuticles cuticular transpiration plant water balance and growth, Maarten D. Schreuder

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Invasive potential of Tamarix ramosissima (Saltcedar) in continental climates of North America, Jason Patrick Sexton

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Breeding biology of birds in a Western riparian forest: From demography to behavior, Joshua J. Tewksbury

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Structure use and function of song categories in Brewer's sparrows (Spizella breweri), Brett L. Walker

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Planning for restoration of Sleven's Island at Fort Missoula: Pilot study and mapping curriculum, Kathryn E. Warner

Theses/Dissertations from 1999

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Mechanisms limiting a vertebrate invasion: Brook trout in mountain streams of the northwestern United States of America, Susan B. Adams

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Environmental gene regulation by DNA supercoiling in Borrelia burgdorferi, Janet Alverson

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Characterizing the molecular biology of a bacteriophage-like particle from Bartonella bacilliformis, Kent D. Barbian

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Costs of resistance in a mustard plant (Arabidopsis thaliana) associated with two specialist insects| Crucifer flea beetles (Phyllotreta cruciferae) and diamondback moths (Plutella xylostella), Bridget Barker

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Ecological restoration after removal of exotic conifer plantations in Argentine Patagonia's Nahuel Huapi National Park, Marion E. Hourdequin

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Transplanted whitebark pine regeneration | the response of different populations to variation in climate in field experiments, Janet Howard

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Identification and characterization of a unique DNA-binding protein in Borrelia burgdorferi, Scott W. Knight

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Factors affecting the distribution and productivity of the American dipper (Cinclus mexicanus) in western Montana: Does streamside development play a role?, Sophie A. Osborn

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Search for sex-linked markers in pink salmon (Oncorhynchus gorbuscha), Kristine Laurel Pilgrim

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The effects of body size and morphology on the flight behavior and escape flight performance of birds, Jerred J. Seveyka

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Regional muscle activity and length dynamics of the avian pectoralis during flight, Cassie A. Shigeoka

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Oxathiolane nucleoside analog resistance in a pathogenic molecular clone of feline immunodeficiency virus and Mapping in vivo replication and pathogenesis determinants of Aleutian mink disease parvovirus, Mary Ann Stevenson

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Effect of DNA polymerases on the production of short tandem repeat stutter bands, James M. Streeter

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Heterozygosity and fitness in rainbow trout : marker loci or chromosomal segments?, Giles C. Thelen

Theses/Dissertations from 1998

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Factors affecting fractionation of stable carbon and nitrogen isotopes in birds, Paul E. Allen

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Evolution of sexual dimorphism in birds: Ecological patterns current selection and ontogenetic variation, Alexander V. Badyaev

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Influence of vertical hydraulic exchange on habitat heterogeneity and surficial primary production on a large alluvial flood plain of the Middle Fork Flathead River, Thomas S. Bansak

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Development of a system for genetic manipulation of Bartonella bacilliformis, James M. Battisti

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Comparative energetics and life cycle of the opossum shrimp (Mysis relicta) in native and non-native environments, Dale W. Chess

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Identification of the subcellular location of the a-2,3-sialyltransferase of the bacterial pathogen Neisseria gonorrhoeae, Lisa R. Chiles

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Ecological and physiological constraints on avian incubation behavior and nest-site selection, Courtney J. Conway

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Microbial respiration in the hyporheic zone of an alluvial floodplain aquifer, James A. Craft

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Ecological and evolutionary determinants of incubation strategies in three sympatric nuthatches (Sittidae), Cameron K. Ghalambor